Morgan Jackson

Apr 272012
 

Yes, World Tapir Day is a real thing. No, you don’t get the day off work.

As consolation, enjoy this photo of a juvenile South American Tapir (Tapirus terrestris) from Ecuador.

South American Tapir Tapirus terrestris

 

All four species of tapir (3 spp. in South America, 1 in southeast Asia) are currently listed as vulnerable or endangered on the International Union for Conservation of Nature’s Red List. The South American Tapir has the largest range of all tapirs, spanning the majority of the Amazon river basin, yet is still under threat from habitat destruction and poaching.

Tapir’s are usually difficult to see in the jungle, preferring to go about their business through the night. So how did I get a close up photo in the middle of the day? The research station I was working at had adopted her1 after her mother was killed by the local Huaorani tribe2, and thus she was quite friendly, coming right up to greet our group when we arrived. Later in our visit, she nearly gave me a heart attack when she came thundering out of the jungle looking for attention while I was looking at a fly. Needless to say, I nearly spread some extra fly bait that day…

 

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1 – While my tapir-sex-identification-skills are a little rusty, I recall being told by the staff that this was indeed a young female.

2 – While the station is situated within Yasuni National Park, the indigenous Huaorani people are allowed to continue their traditional way of life. Unfortunately, the Huaorani have found an easier way to go about life; by selling bushmeat and live animals destined for the pet trade at market in the nearest cities. The research staff went so far as to paint their rescued tapir with bright white paint to try and deter the locals from killing it, though the tribe made no promises about it’s potential fate.

Apr 202012
 
Willi Hennig - The Father of Modern Phylogenetic Systematics

Willi Hennig (Image by Gerd Hennig, CC-license, Wikipedia)

The science of taxonomy is rooted in history, with every taxonomist standing on the shoulders of giants that came before. Some of these giants are well known outside of taxonomic circles: Carl Linnaeus, the godfather of taxonomy who categorized life and introduced binomial nomenclature; Charles Darwin & Alfred Russel Wallace, co-discovers of evolution through natural selection and both prolific descriptive taxonomists in their own right. A lesser known giant, Willi Hennig, was not only a brilliant taxonomist, but also revolutionized the way in which we study & reconstruct species relationships. Today (April 20, 2012) marks what would have been his 99th birthday, and in his honour, I invite you to sit back and allow me to tell you a story of flies, war and why you & I are fish.

Willi Hennig was born April 20, 1913, the eldest son of working class parents, in Dürrhennersdorf, Germany. Hennig excelled throughout his schooling, developing a passion for insects by the 5th grade, and began working at the Dresden State Museum of Natural History while still a teenager. After a few years studying the taxonomy of reptiles, Hennig found his true passion, dipterology. Starting somewhere between 1932 and 1934, Hennig began revising the stilt-legged flies (family Micropezidae), completing his revision in 1936. Hennig erected 10 new genera and described 93 new species over several papers spanning 300+ pages. Concurrently, Hennig found time to publish papers on stilt-legged fly biogeography, more reptile taxonomy, and he also completed his PhD (on the copulation apparatus and system of the Tanypezidae; another lineage of acalyptrate flies), all before he was 24.

Poecilotylus species eating off a tree trunk in Bolivia Micropezidae

This stilt-legged fly belongs in the genus Poecilotylus, one of the genera Hennig created in his early Micropezidae work.

Hennig was beginning to rethink how species were related, but before he could further explore his ideas, German politics and a world at war intervened.

Enlisted into the German army in 1938, Hennig fought for Nazi Germany (though he was never a member of the National Socialist party) until 1942 when he was severely injured while fighting in Russia. After recovering from his injuries, Hennig was posted to Italy as a military entomologist and put to work on malaria prevention. In May of 1945, as the war was nearing an end, Hennig’s unit was captured by British soldiers, and he became a prisoner of war. His British captors recognized Hennig’s potential, and rather than placing him under confinement in a prison camp, allowed him to continue his work on malaria for the benefit of the Queen.

For 5 months while confined to the “service” of the British army, Hennig refined his hypotheses on the evolutionary history of species. With the help of his wife Irma, who corresponded with colleagues and journals on his behalf (because he continued to publish throughout the war), and who included hand-written excerpts of the scientific literature in her letters to him, Hennig completed his first draft of one of the most important biological manuscripts of the 20th century, all by hand while a POW, prior to his release in October, 1945. It would be another 5 years until his book would be published in Germany because of a paper shortage, and a further 16 years until the English-speaking world was introduced to Willi Hennig’s revolutionary Phylogenetic Systematics.

Prior to Hennig’s book, species (and higher taxa) were clustered by overall similarity without regard for their evolutionary history, a method known as phenetics. What set Hennig’s phylogenetic systematics apart was the idea that species evolved from one another, and thus species should be classified as complete units descended from a recent common ancestor (a concept known as monophyly).

Phenetics vs Cladistics

Phenetics vs Monophyly (Modified image from lattice CC-BY)

Think of a tree; with phenetics, leaves from different branches could be grouped together because they looked the most similar to one another. Phylogenetic systematics on the other hand, posited that only leaves arising from a shared branch should be classified together, regardless of how those leaves may look. How do you know the origin of the branch when all you have in front of you are the leaves? Hennig’s answer was to find defining characters or traits that were unique to the tip branches but which were different from the branches closer to the trunk of the tree.

It’s Hennig’s concept of monophyly that makes us all fish. You see, what we call fish, tasty aquatic vertebrates with fins and gills, are actually a number of different evolutionary lineages, each arising successively like twigs off a tree branch. One of those twigs near the end of the branch became the terrestrial vertebrates, which in turn has smaller twigs each representing amphibians, reptiles, birds (which are actually reptiles for the same reason we’re fish) and mammals. So, if we consider separate twigs of aquatic, gilled vertebrates as “fish”, then we must also consider our twig of terrestrial vertebrates “fish” since the most recent, common ancestor of all the “fish” also gave rise to us!

Fish Phylogeny

Fish Phylogeny (Image modified from Understanding Evolution)

In retrospect it seems a simple idea that species should follow a branching pattern from a common ancestor like Hennig proposed, but the upheaval of decades of work on species relationships was indeed revolutionary, and was viciously opposed by many biologists. In fact it wasn’t until the late 1980s that phylogenetic systematics came into vogue, in most part thanks to a new, young cohort of taxonomists who adopted the moniker of “raving cladists”.

Hennig meanwhile, continuing his work with flies, applied his phylogenetic systematics across a large diversity of dipteran families, examined flies sealed in ancient amber for evidence of ancestral characters, and published dozens of papers (across thousands of pages) that redefined the higher relationships among flies and described new species. It was at work in his museum that Hennig preferred, only twice venturing from Germany to examine fly collections in Australia, the USA, and Canada, where he spent several months working in what is now the Diptera Unit of the Canadian National Collection of Insects in Ottawa.

Oh, to be a fly on the wall in this room for the day! Back row from left: Frank McAlpine, Herb Teskey, Guy Shewell. Front row from left: Monty Wood, Dick Vockeroth, Bobbie Peterson, Willi Hennig.

Oh, to be a fly on the wall in this room for a day! So much dipterological knowledge all concentrated in one room, it must have been amazing. Back row from left: Frank McAlpine, Herb Teskey, Guy Shewell. Front row from left: Monty Wood, Dick Vockeroth, Bobbie Peterson, Willi Hennig. (Image from Cumming et al, 2011)

Willi Hennig wouldn’t survive to see his work become fully appreciated by the scientific community. After a normal day working in his museum looking at larval flies, Willi Hennig suffered a heart attack and died at home on November 5, 1976. Although he died much too young, his legacy lives on; his work with stilt-legged flies is second to none, many of his hypotheses regarding the higher relationships of flies are being supported with new DNA data, and biologists around the world use phylogenetic systematics on a daily basis.

Happy Birthday Willi, and thanks for all the fish.

Willi Hennig (Image by Gerd Hennig, CC, Wikipedia)

 

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All biographical information was taken from the following sources:

Byers, George W. 1977. In Memoriam: Willi Hennig (1913-1976). Journal of the Kansas Entomological Society, 50 (2): 272-274. http://www.jstor.org/stable/25082934?origin=JSTOR-pdf

Kluge, Arnold G., Bernd Hennig. No Date. Willi Hennig. Willi Hennig Society – http://cladistics.org/about/hennig

Schmitt, M. 2003. Willi Hennig and the Rise of Cladistics. Proceedings of the 18th International Congress of Zoology: 369-379.

Dipterist Group Photo:

Cumming, Jeffrey M., Bradley J. Sinclair, Scott E. Brooks, James E. O’Hara, Jeffrey H. Skevington. 2011. The history of dipterology at the Canadian National Collection of Insects, with special reference to the Manual of Nearctic Diptera. Canadian Entomologist 143: 539-577.

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Apr 192012
 

After overwintering in a Ziploc bag stored in my barbecue, I was excited to see the first of my Eurosta solidaginis fruit flies (Tephritidae) had emerged from its puparium this morning! This was my first attempt at rearing Goldenrod Gall Flies, so I wasn’t sure what sort of success I was going to have, but so far, so good. Now to wait and see if I get any surprises!

Triumphant Eurosta solidaginis Tephritidae Goldenrod Gall Fly

Eurosta solidaginis (Tephritidae), the Goldenrod Gall Fly

Apr 182012
 

Another week, another Monday night blog challenge from the Bug Geek! Your challenge, should you choose to accept it, is explain your research in 250 words or less in a way that a 10-year-old could understand. Instead of banging my head against the wall on a manuscript (see earlier challenge) I tried my hand at explaining Diptera taxonomy.

What do I do for a living? I collect bugs! Not just any bugs though; I like to catch flies from around the world, bring them back to my laboratory, and figure out what their names are. Just like your parents gave you a name that’s special to you, scientists like me have given names to a lot of the flies around us. Many flies have long complicated names, like Drosophila melanogaster or Taeniaptera trivittata, but these names tell us who the fly is related to, just like your name.

Sometimes when I’m out collecting flies, I find one that has never been seen by a scientist before. That’s when my job gets really exciting, because I get to give that fly a new name! I can name a fly because of how it looks or how it lives, but sometimes I name the fly after someone important. As long as I know who it’s related to, I have lots of flexibility in naming!

There is so much about flies that we don’t know, which means plenty for me to learn.  Most people think you need to travel to faraway jungles to find something exciting, but there are amazing new discoveries waiting for you in your own backyard. There may even be a new fly waiting to be discovered! Learning about flies at home and abroad helps us understand how they live their lives and why they look the way they do.

Not really knowing any 10-year-old children, I hope my explanation isn’t too simplified (I think it’d be ok for my 7-year-old nephew though). Clearly I didn’t really get into the other aspects of my job, like phylogenetics, systematics and disseminating biodiversity knowledge through identification aids (and blogging of course). While I think I could do it, these topics would need another 250 words, and it was already 2am when I finished this bit…

This was a great challenge, and has applications far beyond inquisitive school children. I have family and friends ask what I do and why it matters fairly frequently, and in the past I’ve sometimes felt self-conscious trying to explain it (but that’s a much larger topic for another day). After this exercise, I think I’ve got a few new tricks up my sleeve for the next family reunion!

Toxomerus marginatus Syrphidae on flower

Toxomerus marginatus

Apr 112012
 

Urophora affinis Tephritidae Fruit Fly

 

Urophora affinis, a fruit fly in the family Tephritidae, was introduced to Ontario in the 1970’s as a biological control agent for invasive European knapweeds. When the researchers went back to check on the population a few years later, they were unable to find the species again, and concluded that the population failed to become established (at least in Ontario, a similar introduction in British Columbia did survive).

Fast forward to 2008 when Adam Brunke (a beetle specialist, ironically) collected a specimen in his parent’s backyard, nearly 200 kilometers away from the original introduction site! Clearly Urophora affinis had not only survived, but had even managed to expand it’s range across a large portion of central Ontario, a story which I reported in my paper on Ontario Tephritidae last spring.

Later on in the summer, I accompanied Adam and Steve Paiero (of tongue parasite fame) out to Northumberland County (much closer to the original introduction site) where they were conducting a survey, and happened to find a thriving population of Urophoa affinis in a nice sunny clearing. Nearly every composite flower had an individual or two on top feeding and/or mating, and we collected a long series to place in the University of Guelph Insect Collection. I also walked away with a number of nice photos documenting the species in a new location.

It just goes to show that a species can find a way to survive and prosper, even if they go unnoticed by us!

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Apr 102012
 

Why, you might ask? Because of this:

Cymothoid Tongue parasite SPaiero

Since a piranha-like fish with 1+ inch teeth isn’t scary enough on it’s own, this one has a frickin’ isopod for a tongue! Big sharp teeth, murky water, and a tongue-replacing parasite: need I say more?

This little beauty was fished from the depths by my labmate Steve Paiero while visiting Guyana in January. I can imagine reeling in this Hydrolycus (I think the fish is either Hyrdolycus armatus or Hydrolycus tatauia) would be exciting, but then to remove the hook and find a parasitic isopod looking back at you? Amazing. Or horrifying. I’m not sure.

Cymothoidae isopods1 are one of the stranger parasites out there, and have garnered considerable attention from other bloggers. After entering the fish’s mouth through the gills2, they begin to suck on the fish’s tongue, drawing all the blood from it. As the tongue withers and dies, the isopod takes its place, and helps itself to any food the fish may happen to ingest, making them an odd combination of parasite turned kleptoparasite!

I could find very little taxonomic or natural history information about these isopods, but there is apparently only 1 species of Cymothoid isopod with a penchant for tongue, Cymothoa exigua [Update: Dr. Alistair Dove (@para_sight) of the Georgia Aquarium informs me there are numerous tongue biting isopods. This is unsettling]. Oddly, all accounts I’ve been able to find list Cymothoa exigua as a marine species, and not something you’d expect to find hundreds of kilometers up a river in the mouth of a freshwater fish! Seeing as it has a few more legs than I’m used to dealing with, if someone has a better idea on what’s going on, I’d love to hear about it.

Needless to say, I’m glad I’m not a small guppy potentially staring this in the face one day!

Cymothoid Tongue parasite 2 SPaiero

 

UPDATE April 11, 2012: It seems there are a mouthful of tongue biting isopods in South American freshwater ecosystems. I’m in the process of doing a little more research and will update the identity and biology when I can!

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1- That’s right, this beastie is a cousin of the innocuous little pill bugs (sometimes called potatoe or sow bugs) that you can find in your own backyard.

2- You can see another little isopod latched on to the right side of the mouth in both photos. Whether this is an immature Cymothoa exigua or a different species I’m not sure. Either way, tough luck for the fish!

Apr 022012
 

The Geek In Question posted an awesome graph representing the stages and challenges of scientific publication. You should go check it out right now if you haven’t seen it yet, because it’s spot on! I’m right in the middle of the graph (you know, the big pit of despair part) on a couple of manuscripts currently, and am really looking forward to that beer-drinking phase!

Until then, I figured I’d join in and provide my take on the taxonomic process, which has it’s own series of highs and lows!

Fun look at how species are described

 

This may seem intimidating, but trust me, I love what I do and couldn’t imagine doing anything else with my life! I also might be exaggerating a little bit in some of those low areas (except for the phylogenetics software, that stuff blows), but nothing beats the highs of collecting, species discovery, and making your work accessible to the world!

 

 

Mar 302012
 

You may have noticed that this blog has been rather quiet lately. Too quiet… My apologies for that, as there’s been a lot of cool science going on in my absence! I hope to get caught up on some of the delightful Diptera discoveries that have been published lately, not to mention all sorts of other fun stories, but for now they’ll have to wait for another day.

Why have I been neglecting the blog as of late? In January I was offered the opportunity to build and teach a Horticultural Integrative Pest Management and Plant Health course for Mohawk College in Hamilton, and I saw it as an excellent chance to expand my CV and gain valuable teaching experience (also make some money, ’cause that’s pretty important). I knew from the outset that I was in for a challenge; I was hired less than 2 weeks before the course began; my combined knowledge of IPM, botany and horticulture amounted to 1 university IPM course and some extremely black thumbs; and oh yeah, I’ve never constructed and taught a course before! Nevertheless, I took the rough curriculum the college provided and set out to make my mark on the horticulture class of 2012.

I expected this course to be as much a learning exercise for myself as it would be for my students, and it certainly lived up to expectations. Here are a few things I learned while teaching.

1) Lesson preparation will take longer than you anticipate

Before accepting the position I tried to guess how much time I would need to devote to the different projects/duties I have on the go:

Time Management Guess

An example of poorly estimated time commitments (and poor penmanship)

You probably guessed that those 6 hours/week of blogging didn’t happen, with much of that time being spent on lecture preparation. The amount of time needed to prepare lectures from scratch really blew me away, and I usually ended up spending at least one day on the weekend plus all day Monday & Tuesday getting ready for my 5 hour lecture on Wednesday. Because IPM isn’t my area of expertise, a lot of my time was spent on background research, getting up to speed on topics before trying to teach it back to my students. Theoretically that prep time would go down if I was teaching something I was more familiar with (i.e. taxonomy or general insect diversity), but the decrease probably wouldn’t be that dramatic. I must admit that I learned and retained more having to teach these topics than I did as a student sitting through class…

 

2) Five hour lectures require creativity (and a good night’s sleep)

A 5 hour class is not an ideal learning environment, especially for a group of students who would much prefer to be outside! In order to try and retain their attention, I broke my class into 4 segments with short breaks in between: 1 hour of review & quiz covering the previous week’s work, 45 minute lecture on Topic A, 1 hour lecture on Topic B, and 1.5 hour pest identification lab. I found this worked pretty well, with the students still paying attention through most of the classes, and only occasionally head bobbing (which is pretty hilarious to see from the front of the room, albeit a little disheartening).

Trying to keep the students engaged for each of these lessons required a little more work. I found YouTube to be invaluable, providing a lot of great resources to help illustrate my points (and give me a chance to grab a sip of water). If you’re interested, I’ve created a playlist of all the videos I included (or promoted) in my lectures; 72 clips in all. Some of them might seem a little odd out of context, but they made sense (mostly). Of all the videos I showed, I think I got the largest reaction out of the early DDT propaganda videos; seems the students didn’t like the idea of eating their cereal with a helping of insecticide…

I tried to draw on my natural history & pop culture knowledge to draw the students into the topics. Whether it was using Jacob from the Twilight series to introduce the concept of the “silver bullet” (heh) or using movie plots to explain the differences between invasive species control tactics (Containment = Outbreak; Control = Night of the Living Dead; Eradication = Independence Day), by bringing pop culture references into the lecture I could usually get the students to show signs of life. My students also seemed to enjoy parasititism, so anytime I could find a way to work a parasite into a topic I did.

Also, it seems giving a 5 hour lecture is physically exhausting! I’m not sure whether it was the standing/pacing or the mental marathon to stay ahead of the students, but I was pretty wiped each afternoon following my class. Make sure to eat your Wheaties prior to teaching, and have something to drink nearby!

 

3) Blog posts are a great way to keep students engaged outside of the classroom

Every week I assigned my students a blog post to read, and rewarded those that read it with a bonus question on the next week’s quiz. It was a great way to expose the students to topics and stories that tied back to our lectures but which weren’t necessarily about IPM. Judging by how many students got the bonus question correct each week I think they enjoyed the posts as well. Here are the posts I assigned over the semester (they’re all worth a read, believe me):

The Home Bug Garden – Clivia Foodweb: Part II

Not Exactly Rocket Science – The world’s biggest market (and it’s underground)

This Scientific Life – Berry Butts: Parasitized Black Ants Resemble Red Berries

The Beacon News – Hunting for the super-bug

Not Exactly Rocket Science – Since pythons invaded, Florida’s mammal populations have crashed

BioBlog – blood-sucking vampire moths!

Not Exactly Rocket Science – Scientists and tourists bring thousands of alien seeds into Antarctica

About.com Insects – Before You Mulch, Read This

 

Look Ma, no wings! (female Fall Cankerworm - Alsophila pometaria)

4) Seeing a student make a breakthrough makes all the hard work worthwhile!

It’s amazingly rewarding when a student asks a question that shows they’re engaged and curious about a topic. Case in point, while discussing gypsy moths (Lymantria dispar) I noted that adult females don’t fly, instead waiting for males to come to them. Having discussed the Fall Cankerworm1 a few minutes earlier, one of my students eagerly asked why female gypsy moths invest energy in developing wings which they never use2? Suffice to say I could hardly answer because I was geeking out over the question! Not only was she clearly connecting the dots between ideas, but she was applying advanced ecological & evolutionary concepts to something she’d only just been introduced to! SO AWESOME. It was these sort of moments that made every second I spent on lecture preparation worthwhile!

Of all the things I learned over the course of the semester, the most important was that I really enjoy teaching! I’ve had some experience with teaching before3, but never to this degree. There are certainly some areas of my teaching that I’d like to improve on moving forward, but overall the semester was a success, and my students walked away happy (or so they tell me at least). This course was a nice confirmation that I’m heading down the correct career path, and I’m already excited to give it another shot in the future.

IPM Class Photo 2012

My class on our grower field trip. Thanks for a great semester everyone!

 

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1 – Female Fall Cankerworms are also flightless, but have wings that are reduced to tiny little stubs.

2 – This is almost an exact quote, she actually said “invest energy”. It blew my mind in a good way!

3 – I’ve given several guest lectures at the University of Guelph and was a teacher’s assistant on an entomology field course.

Mar 252012
 

This past week saw some unseasonably AWESOME weather around Southern Ontario, allowing me to break out the shorts and sandals nice and early. Better yet, our local fauna has started to emerge from their winter hiding places, with flies buzzing, ants battling, and frogs calling!

Thursday evening I went out to a local conservation area with a few of my labmates in search of the early indicators of vernal vertebrate life: spring peepers (Pseudacris crucifer). It wasn’t long until we heard the high pitched squeaks of males calling throughout a small pond, so we donned waders and headed in to the water! Of course, just because you can hear the males doesn’t mean their easy to find, especially in a mucky-bottomed pond hiding logs just waiting to drag you (and your photo gear) into the depths, and among clumps of reeds forming perfect hiding places & bandshells for their performances. Add to that dozens, if not hundreds, of calling frogs, and you have an ear-splitting distraction which makes it difficult to hone in on a single individual!

Eventually I did find a male who was out in the open and doing his best to seduce any potential mates in the area. While being in the open made it easy for me to see and photograph him, it also made it easy for him to see me coming, causing him to stop calling as soon as I crawled in close for a photo. With some patience, a better angle, and some interesting body contortions, I finally got a few photos I was happy with.

Spring Peeper (Pseudacris crucifer)? More like Spring Peeker

Spring Peeper (Pseudacris crucifer)? More like Spring Peeker...

 

Why you no call for me Spring Peeper?

Why you no call for me Spring Peeper?

 

Spring Peeper (Pseudacris crucifer) in mid call

Success! Spring Peeper (Pseudacris crucifer) in mid call

Presumably this male will eventually find himself a mate, hold on tight and contribute his spawn to the pond ecosystem. Perhaps one day his progeny will emerge as tiny froglets, like this young’un I found in Maryland a few summers back.

Spring Peeper froglet dealing with the jungle of a lawn!

Spring Peeper froglet dealing with the jungle of a lawn!

Funny story to finish off; when I got home Thursday evening I posted to Twitter:

 

It was a good lesson in word choice, as I had several followers asking why I wanted to hurt these innocent little frogs or what caliber firearm I was using… Oops! Rest assured that no spring peepers were harmed in the production of this blog post!

Mar 142012
 

Take a look at what came in the mail last week:

Bug Geek Pride Wear

That’s right, I’m wearing the season’s hottest new fashion item: Weevil on Cotton by the Bug Geek!

Here’s the deal: you can get your own right here (with a Pi-day special to boot), and all the proceeds go to help grad student/bug blogger extraordinaire The Geek in Question (AKA the Bug Geek) attend BugShot 2012! All sorts of win going on people!

Of course, if you prefer your Bug Geekery filled with coffee, there are plenty of fashionable options!