Jun 262012
 

You may have noticed the Weekly Flypaper has been missing the past two weekends. I have a good reason for missing one, and a not so good reason for missing the other…

First, the good reason. I took part in the Rouge Park BioBlitz in Toronto, and along with 230+ other naturalists, taxonomists and volunteers, we scoured Rouge Park (soon to be Canada’s first urban National Park) for all signs of life, trying to identify as much as possible in 24 hours. Although the numbers are still coming in, the official species count is already nearing 1,300 species, all sighted or caught in 24 hours (and more than 800 of those were identified within the first 24 hours too)! That is an absolutely amazing number, and sets the bar very high for future BioBlitzes! The Guelph crew had a great time, and I think we contributed almost 100 insect species identifications, including 60+ flies. Lots more came home with us, and we’ll be getting names on them in the near future to be added to the list. The arthropod coordinator, Antonia Guidotti of the Royal Ontario Museum has posted an awesome synopsis of the BioBlitz over at the ROM Blog.

The other reason? I was lazy last weekend and didn’t get around to doing it. Oops.

So with 3 weeks worth of links, and major holidays upcoming in Canada & the USA, I suggest you grab a cold drink, find a comfy spot, and clear your schedule, because the Bugosphere has been busy!  Continue reading »

Jun 202012
 

Well this is fun1: an entomologist in New Zealand has decided to name a recently discovered moth species after the movie Avatar.

Arctesthes avatar

Arctesthes avatar courtesy of the Forest & Bird press release

The moth in question was recently discovered on a parcel of land in central New Zealand which is currently slated to become an opencast coal mine. In an effort to prevent the area from being destroyed, Forest & Bird (a conservation group in New Zealand) staged a BioBlitz to draw attention to the unique flora & fauna found there. After realizing that they had discovered an undescribed species at the BioBlitz, entomologist Brian Patrick and his son decided to hold a contest, encouraging the public to come up with a potential name for the new species to further draw attention to the cause.

After nearly 100 names were submitted, it was announced June 19, 2012 that the winning name will be Arctesthes avatar. From the press release:

Brian said the Avatar moth was a clear winner. “It was by far the best one. It’s a novel name and the movie is about a mining company that threatens to devastate a human-like species that’s living in harmony with nature. It’s just a really good analogy.”

As we’ve seen with other species names referencing pop-culture icons, the New Zealand media picked up the story and ran with it, publishing the story, the name, and a photo of the moth. Normally this would be great exposure for the researchers (and biodiversity science in general), getting some press for a new species in a location that’s not that far from populated areas.

Unfortunately for the researchers, they may have put the cart before the horse on this one by publicizing their discovery before publishing it themselves.

Unlike other sciences, where you may be able to get away with leaking your results a little ahead of your publication2, when it comes to naming species it’s incredibly important to wait until you’ve actually published. The reason being that if the new species name appears in a publication that has multiple, simultaneously printed copies (like the NZ Herald/Greymouth Star newspapers3) with even a semblance of a description (like “striped moth”, which has been used repeatedly with this story) and/or a photograph (see above), whoever wrote that article becomes the authority behind the name! Nevermind that Brian Patrick is the taxonomic expert, collected the specimen, recognized it as being unique, discovered where it belonged in the tree of life and, in this instance, acquired DNA evidence. All of that will go unrecognized4 and the first journalist who wrote up the story off the press release will go down as the one who formally described the species!

Simply put, instead of being recorded as Arctesthes avatar Patrick & Patrick 2012, the species will be known as Arctesthes avatar RandomJournalist 2012. Oops!

The fact that new species descriptions needn’t be published in a peer-reviewed journal may come as a surprise, but I think it’s an effort to keep taxonomy an accessible science for anyone, anywhere. It’s clear that some funny things can happen when there are few restrictions on where a species can be described, and as the Code of Zoological Nomenclature moves into the digital age with the next edition, many taxonomists are hoping that registration services like ZooBank will play a big role in new species descriptions and validation in the future. Until the new “Code” is ratified however, unfortunate events like what happened here with Arctesthes avatar are possible.

So remember kids, when you go to describe a new species, publish first, publicize second!

UPDATE 27/06/2012: As Kai pointed out in the comments below, the authors have escaped this embarrassing scenario because none of the media stories will likely include enough information to form a proper type designation.

——————–

1- My definition of fun and that of the entomologist involved are probably different here…

2- Although I would assume this is frowned upon as well.

3- Thanks to David Winter of the Atavism for help tracking these sources down.

4- They’ll still publish their work, but it won’t actually be a new species description anymore.

May 272012
 

This has been a very busy week for insect news & science, and there are a ton of great things to keep you busy reading all weekend. First though, I need to get something a little broader but incredibly important off my chest.

Prime Minister Stephen Harper’s War on Environmental Science

I don’t normally wade into discussing politics because 1) I don’t follow it as closely as perhaps I should and, 2) it can be a pretty controversial topic which can get messy in a hurry. I don’t want to weigh this week’s flypaper down too much, but I feel compelled to share a number of deeply concerning developments in the Canadian government’s recent cuts to environmental research.

The Environmental Lakes Area, a world-class facility studying the affects humans and our products have on freshwater ecosystems, is being closed down.

If we’re not studying the affects of pollution on freshwater ecosystems, I guess we can still keep track of pollutants in marine environments. Wait, you mean that entire department has been cut as well? Oh. (As a slightly ironic aside, even the US media is picking this one up and questioning what the hell Canada is thinking)

Well, certainly our protected terrestrial environments will be studied and Canadian National Parks kept safe. No?! You have got to be kidding me. (It’s not only the natural history aspects of Parks Canada getting cut, it’s also our cultural history.)

Add to this the thousands of jobs cut across the Canadian Food Inspection Agency, Agriculture & Agri-Food Canada, Environment Canada, Public Health Agency of Canada and Health Canada, and it’s not hard to see that our current government views scientists & environmental research as an inconvenient truth (especially when they don’t tow the party line).

I’m incredibly proud to call Canada my home & native land, but am utterly ashamed of these “cost saving” measures being rapidly pushed through by the Conservative government. These short-sighted cuts will have long-lasting environmental ramifications well beyond the tenure of any political party’s leadership, will tarnish Canada’s reputation as an environmentally-friendly nation, and will hamper our ability to attract new minds to our universities, industries and governments. I have no doubt that in 10-15 years we will look back on this government and wonder “O Canada, what have you done?”

————

OK, that’s enough doom and gloom for one week. Now onto some bug links!

General Entomology

What would you classify angels as? If you said winged humans, you’re wrong. Clearly they’re insects. And in case you’re interested, the Taxonomy Fail Index for such a gaff is 122.3!

Tardigrades are pretty awesome, but this plush tardigrade by the Weird Bug Lady is way beyond cute!

Ani of Wanderer’s Eye documented the insect fauna of the Northwestern Ghats in India during last year’s monsoon season, and has put together an absolutely stunning e-book/slideshow. Amazing first step to documenting the insects of this poorly studied area; a must read!

Most people are familiar with entomopathogenic fungi in agricultural or tropical ecosystems, but what about in the Arctic? Chris Buddle explains why it’s important that we start learning about it soon.

Not shocking, but enlightening: city street lighting is changing the guild ecology of arthropods.

The Dragonfly Lady has 5 possible reasons why insects are so scarce in the ocean. I tend to follow the “Crustaceans were here first” line of thinking, but some of the other hypotheses are intriguing.

I’m not sure how I hadn’t heard of this project until now, but DrawWing aims to provide insect identifications via automated wing vein comparative analysis. Here’s some more info if you’re interested.

Diptera

It must be nearly summer, the stilt-legged flies are out and about again! Nice pictures of Rainieria antennaepes by Dave Stone at Things Biological.

Debbie Hadley at About.com Insects has a fun ID challenge this week. Think you can solve it?

How many flies are too many in a public bathroom? If you’re in Beijing, apparently 3…

One day I will make it to New Zealand and observe the caves of glow worms myself. Absolutely amazing spectacle, and something I can’t wait to see.

BugGuide.net is an awesome resource for North American insect lovers, and a big reason for that is the willingness of professional taxonomists like Terry Wheeler to contribute their time and knowledge to curating submitted images.

I suppose this great interview of Mohamed Noor is more about academia and evolutionary biology, but he uses fruit flies other than Drosophila/Sophophora melanogaster so I’ll leave it here in the fly files!

Hymenoptera

Bug Girl keeps the heat on the CCD-pesticide-bee health debate.

If you think all bees live in hives and produce honey, you’d best read this excellent primer on solitary bees by Africa Gomez at BugBlog.

Coleoptera

Ted MacRae has a touching tribute to Chuck Bellamy, a world-renowned expert in jewel beetle (Buprestidae) taxonomy, and the latest honorary member of the Coleopterists Society.

A genus of jewel beetles (Melanophila) have infra-red sensing organs more sensitive to forest fires than most man-made devices. Hot stuff!

Warning: this next link contains graphic images of beetles in compromising positions. What are they doing? You’ll just have to click to find out…

Lepidoptera

A lot is said about new digital cameras and their increasingly huge megapixel counts, but BunyipCo shows off the potential for entomology that a high megapixel camera can provide.

Arachnida

Earlier this year, major bank JP Morgan Chase suffered a multi-billion dollar financial meltdown, and it was just revealed that one of the leading causes was the chief executive being out of the office for significant amounts of time while she received treatment for Lyme Disease.

Another week, another stunning photo of a spider. This time by Rick Lieder at Bug Dreams.

Taxonomy/Biodiversity

This past Thursday was Carl Linnaeus’ 305 birthday, and the Biodiversity Heritage Library has a nice biography and a special download gift to help celebrate.

Natural history collections are a wealth of information, but sometimes that information comes in poorly appreciated packages. Like bottles of bird stomach contents cared for by an entomologist.

Other Fun Stuff

Scientific illustration meets comic book hero anatomy. Wicked anatomical drawing by Glendon Mellow.

So it turns out you can perform your own backyard DNA extraction using only the ingredients you’ll find in a strawberry daiquiri served in a soapy glass…

And now for a little etymological history. Ever wonder how those naughty little four letter words came into such infamy (or retreated from it)? Or why a question mark is squiggly while an exclamation mark is straight?

Finally, check out this great video about becoming a naturalist in your own backyard by the crew at Days Edge Productions. I loved every second of it!

Further Reading

Bora Zivkovic – The Scienceblogging Weekly

Ed Yong – Missing Links

Apr 182012
 

Another week, another Monday night blog challenge from the Bug Geek! Your challenge, should you choose to accept it, is explain your research in 250 words or less in a way that a 10-year-old could understand. Instead of banging my head against the wall on a manuscript (see earlier challenge) I tried my hand at explaining Diptera taxonomy.

What do I do for a living? I collect bugs! Not just any bugs though; I like to catch flies from around the world, bring them back to my laboratory, and figure out what their names are. Just like your parents gave you a name that’s special to you, scientists like me have given names to a lot of the flies around us. Many flies have long complicated names, like Drosophila melanogaster or Taeniaptera trivittata, but these names tell us who the fly is related to, just like your name.

Sometimes when I’m out collecting flies, I find one that has never been seen by a scientist before. That’s when my job gets really exciting, because I get to give that fly a new name! I can name a fly because of how it looks or how it lives, but sometimes I name the fly after someone important. As long as I know who it’s related to, I have lots of flexibility in naming!

There is so much about flies that we don’t know, which means plenty for me to learn.  Most people think you need to travel to faraway jungles to find something exciting, but there are amazing new discoveries waiting for you in your own backyard. There may even be a new fly waiting to be discovered! Learning about flies at home and abroad helps us understand how they live their lives and why they look the way they do.

Not really knowing any 10-year-old children, I hope my explanation isn’t too simplified (I think it’d be ok for my 7-year-old nephew though). Clearly I didn’t really get into the other aspects of my job, like phylogenetics, systematics and disseminating biodiversity knowledge through identification aids (and blogging of course). While I think I could do it, these topics would need another 250 words, and it was already 2am when I finished this bit…

This was a great challenge, and has applications far beyond inquisitive school children. I have family and friends ask what I do and why it matters fairly frequently, and in the past I’ve sometimes felt self-conscious trying to explain it (but that’s a much larger topic for another day). After this exercise, I think I’ve got a few new tricks up my sleeve for the next family reunion!

Toxomerus marginatus Syrphidae on flower

Toxomerus marginatus

Apr 022012
 

The Geek In Question posted an awesome graph representing the stages and challenges of scientific publication. You should go check it out right now if you haven’t seen it yet, because it’s spot on! I’m right in the middle of the graph (you know, the big pit of despair part) on a couple of manuscripts currently, and am really looking forward to that beer-drinking phase!

Until then, I figured I’d join in and provide my take on the taxonomic process, which has it’s own series of highs and lows!

Fun look at how species are described

 

This may seem intimidating, but trust me, I love what I do and couldn’t imagine doing anything else with my life! I also might be exaggerating a little bit in some of those low areas (except for the phylogenetics software, that stuff blows), but nothing beats the highs of collecting, species discovery, and making your work accessible to the world!

 

 

Feb 282012
 

Over the past 250 years, hundreds of thousands of flies have been described and given names by taxonomists from around the world. Many of these names have stood the test of time and are still in use today (the common house fly Musca domestica was named by Carl Linneaus in 1758, for example), but many names did not make the cut; sometimes because the species they were assigned to already had names from earlier scientists, sometimes because the name was being used for another animal, and sometimes because we gained a better understanding for how species are related and moved them to a new branch on the tree of life. These synonymous names remain important to us though, and can’t just be discarded or forgotten about, as sometimes they get a second chance at fame following the discovery of new specimens or new characters! Managing all of these names, searching for obscure papers published at any point in the last 250 years and knowing every little detail about a species’ scientific heritage is what keeps taxonomists busy from day to day. Taxonomists are modern day treasure hunters, following maps laid out by our taxonomic forefathers and searching for hidden gems in new & undescribed species.

Traditionally, species names have been tracked in small batches during the course of taxonomic revisions, being updated once a generation or two if we’re lucky. For decades, taxonomy has been underfunded, understaffed and unappreciated, meaning even these small revisions are being done less and less frequently, and by fewer people each generation. This has lead to a situation that has been termed the Taxonomic Impediment. Put simply, there are too many unknown species and not enough time, money or scientists to describe them, with many species disappearing before we even realized they were there.

In the internet age, taxonomists can communicate, collaborate, and compile their expertise into larger ideas and bigger projects. By working together, taxonomists today have begun consolidating tools in open access resources available to the community at large, and more importantly, the public. One such resource is Systema Dipterorum, a clearing house for fly names and taxonomic information. This library of fly taxonomy has been an ongoing project for the past 20 years, originally spearheaded by Dr. F. Christian Thompson, a veteran fly taxonomist and one of the world’s foremost experts on flower flies (Syrphidae). With the help of dipterists from around the world, and the support of Dr. Thomas Pape and the Natural History Museum of Denmark where the online database has been stored for the past few years, this database of fly names has grown to include more than 160,000 species, for which 250,000 different names have been found, recorded and made available in the database (as reported in FlyTimes Issue 46, 2011), along with authors and citations for when those names were first published.

Systema Dipterorum is a shining example of what a taxonomic community can accomplish, even with the limited financial resources provided to it. Other groups have similar resources (see AntWeb.org for the photographic equivalent for Formicidae) but I regard the Diptera community’s combined efforts as one of the greatest accumulations of taxonomic information anywhere. I use this database weekly during the course of my own taxonomic revisions, but I also consult it for my personal endeavors in order to use the most accurate names in my photography and scientific communication, as well as to satisfy my curiosity.

I also use the database to explore the works of other dipterists, to learn what they are passionate about, and to better understand the work being undertaken around the world. To that regard, I visited diptera.org on February 16 to learn more about the work of Australian dipterist Don Colless, who recently passed away. Instead of a world-leading database, I found this:

Home page for Systema Dipterorum as of February 16 2011

Home page for Systema Dipterorum as of February 16, 2011 (click to enlarge)

 

What made this unsettling discovery even more surprising was Dr. Thompson’s recent commitment to developing the database despite a recent funding cut! Along with Dr. Thompson’s efforts to develop Systema Dipterorum, many from the community have also contributed to the database. Closure of the database is a slap in the face to all who have taken the time to contribute, and a major setback for dipterists everywhere.

Dr. Thompson has said his decision to close Systema Dipterorum was made by the funding cut, but also because he believes he is being forced out of his emeritus position at the Smithsonian Institute in Washington (where he’s been employed for decades). Regardless, Systema Dipterorum should not be used as a negotiating tool, and restricting access holds the entire Diptera community hostage. Hopefully Dr. Thompson and his colleagues will consider officially making the database the property of the global Dipterology community and not remove it, or threaten to remove it again.

As of February 21, Systema Dipterorum has been placed back online, although there appear to be coding issues, with error messages appearing in place of search results, resulting in the system remaining inoperable. Hopefully these kinks will be worked out quickly, restoring Systema Dipterorum to a fully functional state. I can only imagine that administrative abilities and over-arching control strategies will be reexamined after this incident, and safeguards will likely be enacted to prevent a similar situation from occurring again.

The long term future of Systema Dipterorum is anything but assured however. The continual development of this resource will rely on stable funding being available for not only its basic day to day maintenance, but more importantly the continued job of growing the database through the addition of names and taxonomic information. Perhaps it’s time for the international Diptera community to move from an informal association of like-minded individuals (like those found in the North American Dipterists Society or the Diptera.info community) towards a more formal society, complete with an elected governing board, constitution and devoted, voting membership. We’re not far from such a society; the North American Dipterists Society meets biannually, while an International Congress of Dipterology is held every four years, and dipterists have taken to Facebook and other social media to facilitate communication between formal gatherings. I’m sure that establishing an international society can be a delicate endeavor, but what better time than the present to begin the process, promote international collaboration and encourage prospective dipterists from around the world to become involved in a global initiative? An International Society of Dipterists could then be made stewards of Systema Dipterorum, helping to ensure its continued development by research groups and enthusiastic specialists as a leading mandate for the society.

There have been major strides made by the Diptera community to advance not only our knowledge of fly diversity and taxonomy, but also to advance the profile of taxonomists in general. In an age where taxonomists are becoming endangered species, it’s imperative that we band together and remind funding agencies, universities and governments about the vital role the science of taxonomy plays in all aspects of biology, and encourage these institutions to return to investing in the training, employment and funding of taxonomists, before the Taxonomic Impediment becomes the Taxonomic Impoverishment.

 

UPDATE March 5, 2012: It seems Systema Dipterorum is fully functional again. Go find taxonomic info while you can people!

Jan 132012
 

Robert Redford may have a beetle, but musical sensation Beyoncé is fly!

That’s right, Ms. Sasha Fierce has been bestowed with the taxonomic honour of patronymy by Australian dipterists Bryan Lessard and David Yeates.

Beyonce fly Scaptia beyonceae

Bryan was bedazzled by the golden rumped females of the newly described Scaptia beyonceae, a horse fly in the family Tabanidae, and decided to forever immortalize Beyoncé’s Bootylicious bottom. The species may have been a child of destiny, as the type specimen was collected in northern Australia shortly after Beyoncé’s birth, and has only been collected twice since. Nobody knows how this fly species would appear if it were a boy, as all known specimens are female.

I tried reaching Taylor Swift to learn when her own fly would be coming out, but was interrupted by Kanye West who apparently thinks this is one of the best flies of all time. No word yet when junior synonym Scaptia blueivyii will be described, but I’ll keep you updated!

(All kidding aside, Bryan is a cool guy who I met at ESA this past fall. He described another 4 species in the same paper, including one named for Dr. Leigh Nelson (Scaptia nelsonae) which isn’t receiving near the press for some reason…)

 
ResearchBlogging.orgBryan D Lessard, & David K Yeates (2011). New species of the Australian horse fly subgenus Scaptia (Plinthina) Walker 1850 (Diptera: Tabanidae), including species descriptions and a revised key Australian Journal of Entomology, 50 (3), 241-252 : DOI: 10.1111/j.1440-6055.2011.00809.x

Dec 062011
 
Spinops sternbergorum artistic reconstruction by Dmitry Bogdanov

The Victim - Spinops sternbergorum (artistic reconstruction by Dmitry Bogdanov, image from Science 2.0 story)

I don’t use this blog as a platform to rant very often, but a story published on Gawker this afternoon has me all riled up.

In “Moron Paleontologists Find New Species of Dinosaur in Their Own Museum“, author Max Read decides he’s fully qualified to judge how paleontology and taxonomy in general should be done, and criticizes a team of paleontologists for doing something every taxonomist does; study material housed in a museum. That’s right, Mr. Read snidely mocks the authors, who described a very cool new dinosaur species, for not undertaking a grand expedition to parts unknown to find this new species, instead discovering the species while re-examining specimens housed in the British Natural History Museum’s basement collections.

Nevermind the function of a museum is not just to provide a place for ignoramuses like Mr. Read to potentially learn something about natural history and gawk at fantastic displays, but also to actually house the raw data of biology; specimens. Or that people studying  specimens in museums would much rather be exploring exotic new localities but are handcuffed by a critical lack of monetary support for taxonomy, which cuts our ability search for new specimens (which are then brought back to the museum and ultimately stored, although I guess that fact never occurred to Mr. Read either). Or indeed that the process of taxonomy is not as straightforward as looking at a single specimen (or pieces of a specimen as is the case in much of paleontology) and instantly recognizing it as unique and in need of a new name.

The true shame of all this is the fact that the blog network Mr. Read writes for is composed of a number of blogs which routinely write well-versed and well-researched pieces on science and technology (io9 & Gizmodo to be precise). How this fascinating story was forwarded onto Mr. Read and not to authors in those other fine networks who I’m sure could have done it justice is almost as outrageous as Mr. Read’s story itself.

Natural history collections are one of the most valuable resources we have as a society, providing a link to the world around us, and to believe that people shouldn’t be studying the material contained within them is like believing that libraries shouldn’t be used for fact checking. Oh, wait…

(If you want to see how science journalism SHOULD be done, I encourage you to read Science 2.0’s version of the story)

Dec 062011
 

Ryan FleacrestLet me start by saying that when I went looking for a song for this week’s Tuesday Tunes, I didn’t expect to find such a gem as this. All I wanted was something simple that would allow me to segue into some very cool insect news, but what I got instead was one of the worst songs I’ve ever heard, but which actually has some relevant biology included in the lyrics. That being said, consider yourself warned: there’s cool science ahead, but also some really, really, bad music!

The University of California Davis insect collection announced yesterday (with future taxonomic publication to come I assume) that they collected specimens of Bombus cockerelli Franklin 1913 for the first time since 1956. Collected again from it’s extremely restricted known range (a 300 square mile plot of land in New Mexico), this species is understandably rare in insect collections. There has apparently been considerable debate amongst Bombus experts over whether B. cockerelli represented a unique species or whether it was a variant of the much more common Bombus vagans, and with museum specimens 50+ years old, there has been no ability to compare DNA between species. Lead researcher Doug Yanega implies that molecular evidence obtained from these new specimens supports B. cockerelli as its own species, and it will be interesting to see in future publications how this species fits into the larger Bombus picture! Doug has some succinct comments on why it shouldn’t come as a surprise to rediscover an insect species thought to be “lost”, so I’d highly recommend giving the press release a read!

Bombus cockerelli from EOL.org

Bombus cockerelli courtesy of EOL.org (CC-BY-NC-SA)

 

Moving on to this week’s “killer” song, if you grew up in the late 90’s (or had offspring doing so), you’re probably familiar with the musical torture stylings torture that was Aqua, the Danish pop band responsible for the hit song Barbie Girl. This week I bring you another musical instrument of torture, Bumble Bees:

Well, did you catch the surprisingly accurate lyrics as pertaining to pollination biology? From the “Wham bam, thank you mam” insinuating the correct sex for flower visiting bees, to the fact that bumblebees regularly leave “donations” of pollen while “invading” deep flowers, the song is actually pretty good for biology. Even though it sounds horrible, Aqua get props for taking the time to pen some pollination biology into their “music”!

 

If you haven’t had enough, this song is available on iTunes – Bumble Bees – Aquarius